STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AWU59_634Fumarate hydratase; Scaffold_50_19. (278 aa)    
Predicted Functional Partners:
AWU59_635
Fumarate hydratase; Scaffold_50_20.
 
 0.999
AWU59_1029
Malate dehydrogenase; Scaffold_84_3; Belongs to the LDH/MDH superfamily.
  
 
 0.933
AWU59_1609
Succinate dehydrogenase iron-sulfur subunit; Scaffold_145_20.
  
 
 0.922
AWU59_1527
Citrate (si)-synthase; Scaffold_128_8.
  
 
 0.895
AWU59_84
Pyruvate carboxylase subunit B; Scaffold_14_4.
    
 0.801
AWU59_1998
Hypothetical protein; Scaffold_306_9.
    
  0.748
argH
Argininosuccinate lyase; Scaffold_523_2.
    
 0.742
AWU59_1677
Formate dehydrogenase, alpha subunit; Scaffold_168_3.
   
 
 0.736
AWU59_2690
CoB--CoM heterodisulfide reductase; Scaffold_1095_4.
    
 0.733
AWU59_94
CoB-CoM heterodisulfide reductase, subunit D; Scaffold_14_14.
    
 0.733
Your Current Organism:
Methanolobus sp. T824
NCBI taxonomy Id: 1794908
Other names: M. sp. T82-4, Methanolobus sp. T82-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.