STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ42262.1Phage integrase family protein. (86 aa)    
Predicted Functional Partners:
CDQ43187.1
Phage integrase family protein; Belongs to the 'phage' integrase family.
  
     0.506
CDQ42751.1
Transmembrane protein.
     
 0.488
CDQ46144.1
Putative amidophosphoribosyltransferase.
  
    0.471
apt
PRPP-binding protein, adenine/guanine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
  
    0.462
CDQ46133.1
Bacteriophage protein; Belongs to the SOS response-associated peptidase family.
   
  
 0.457
CDQ46442.1
Two-component system sensor kinase.
  
  
 0.451
CDQ43537.1
Prephenate dehydrogenase.
  
    0.449
CDQ46045.1
Multi-sensor signal transduction histidine kinase.
  
  
 0.431
rplI
50S ribosomal protein L9; Binds to the 23S rRNA.
   
  
 0.416
whiA_1
Transcriptional regulator; Involved in cell division and chromosome segregation.
  
    0.410
Your Current Organism:
Mycolicibacterium neoaurum
NCBI taxonomy Id: 1795
Other names: ATCC 25795, CCUG 37665, CIP 105387, DSM 44074, HAMBI 2273, JCM 6365, M. neoaurum, Mycobacterium neoaurum, Mycobacterium sp. ATCC 23071, Mycobacterium sp. ATCC 25798, Mycobacterium sp. ATCC 25799, Mycobacterium sp. ATCC 25800, Mycobacterium sp. ATCC 25803, Mycobacterium sp. ATCC 27277, NCTC 10818
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