STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ42567.1Selenocysteine lyase. (373 aa)    
Predicted Functional Partners:
CDQ44178.1
NifU family SUF system FeS assembly protein.
  
 0.914
yabJ
Enamine/imine deaminase.
  
    0.792
CDQ42569.1
Putative alcohol dehydrogenase.
     
 0.790
argD_1
Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.698
SufC
Iron-regulated ABC transporter ATPase SufC.
  
  
 0.655
CDQ46201.1
Fe-S metabolism associated SufE.
  
 0.648
CDQ44175.1
Iron-regulated ABC transporter permease SufD.
  
 
 0.644
CDQ44174.1
FeS assembly protein SufB.
  
 
 0.643
CDQ42572.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit.
  
    0.584
CDQ42573.1
Dehydrogenase E1 component superfamily protein.
  
    0.571
Your Current Organism:
Mycolicibacterium neoaurum
NCBI taxonomy Id: 1795
Other names: ATCC 25795, CCUG 37665, CIP 105387, DSM 44074, HAMBI 2273, JCM 6365, M. neoaurum, Mycobacterium neoaurum, Mycobacterium sp. ATCC 23071, Mycobacterium sp. ATCC 25798, Mycobacterium sp. ATCC 25799, Mycobacterium sp. ATCC 25800, Mycobacterium sp. ATCC 25803, Mycobacterium sp. ATCC 27277, NCTC 10818
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