Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDQ42234.1 | CDQ42585.1 | BN1047_00083 | BN1047_00440 | TetR family transcriptional regulator. | Ferredoxin. | 0.464 |
CDQ42234.1 | CDQ46553.1 | BN1047_00083 | BN1047_04462 | TetR family transcriptional regulator. | Putative ferredoxin. | 0.414 |
CDQ42584.1 | CDQ42585.1 | BN1047_00439 | BN1047_00440 | Hypothetical protein. | Ferredoxin. | 0.625 |
CDQ42584.1 | CDQ42586.1 | BN1047_00439 | BN1047_00441 | Hypothetical protein. | Cytochrome P450. | 0.625 |
CDQ42584.1 | CDQ42587.1 | BN1047_00439 | BN1047_00442 | Hypothetical protein. | Alpha/beta hydrolase. | 0.532 |
CDQ42584.1 | CDQ42588.1 | BN1047_00439 | BN1047_00443 | Hypothetical protein. | Antibiotic transporter. | 0.525 |
CDQ42585.1 | CDQ42234.1 | BN1047_00440 | BN1047_00083 | Ferredoxin. | TetR family transcriptional regulator. | 0.464 |
CDQ42585.1 | CDQ42584.1 | BN1047_00440 | BN1047_00439 | Ferredoxin. | Hypothetical protein. | 0.625 |
CDQ42585.1 | CDQ42586.1 | BN1047_00440 | BN1047_00441 | Ferredoxin. | Cytochrome P450. | 0.845 |
CDQ42585.1 | CDQ42587.1 | BN1047_00440 | BN1047_00442 | Ferredoxin. | Alpha/beta hydrolase. | 0.658 |
CDQ42585.1 | CDQ42588.1 | BN1047_00440 | BN1047_00443 | Ferredoxin. | Antibiotic transporter. | 0.655 |
CDQ42585.1 | CDQ42589.1 | BN1047_00440 | BN1047_00444 | Ferredoxin. | Transcriptional regulator. | 0.466 |
CDQ42585.1 | CDQ46552.1 | BN1047_00440 | BN1047_04461 | Ferredoxin. | TetR family transcriptional regulator. | 0.559 |
CDQ42585.1 | CDQ46553.1 | BN1047_00440 | BN1047_04462 | Ferredoxin. | Putative ferredoxin. | 0.773 |
CDQ42585.1 | CDQ46554.1 | BN1047_00440 | BN1047_04463 | Ferredoxin. | Cytochrome P450. | 0.452 |
CDQ42585.1 | CDQ46770.1 | BN1047_00440 | BN1047_04684 | Ferredoxin. | Phosphotransferase family protein. | 0.471 |
CDQ42586.1 | CDQ42584.1 | BN1047_00441 | BN1047_00439 | Cytochrome P450. | Hypothetical protein. | 0.625 |
CDQ42586.1 | CDQ42585.1 | BN1047_00441 | BN1047_00440 | Cytochrome P450. | Ferredoxin. | 0.845 |
CDQ42586.1 | CDQ42587.1 | BN1047_00441 | BN1047_00442 | Cytochrome P450. | Alpha/beta hydrolase. | 0.718 |
CDQ42586.1 | CDQ42588.1 | BN1047_00441 | BN1047_00443 | Cytochrome P450. | Antibiotic transporter. | 0.651 |
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