Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDQ42453.1 | CDQ43063.1 | BN1047_00306 | BN1047_00924 | Beta-ketoacyl synthase. | Hypothetical protein. | 0.512 |
CDQ42453.1 | CDQ43064.1 | BN1047_00306 | BN1047_00925 | Beta-ketoacyl synthase. | Glutamate--ammonia ligase; Belongs to the glutamine synthetase family. | 0.407 |
CDQ42453.1 | CDQ43066.1 | BN1047_00306 | BN1047_00927 | Beta-ketoacyl synthase. | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.429 |
CDQ42453.1 | CDQ43067.1 | BN1047_00306 | BN1047_00928 | Beta-ketoacyl synthase. | Short chain dehydrogenase. | 0.664 |
CDQ42453.1 | CDQ44208.1 | BN1047_00306 | BN1047_02084 | Beta-ketoacyl synthase. | Acyl transferase domain-containing protein. | 0.999 |
CDQ42453.1 | CDQ46650.1 | BN1047_00306 | BN1047_04559 | Beta-ketoacyl synthase. | 3-oxoacyl-ACP reductase. | 0.999 |
CDQ42453.1 | map | BN1047_00306 | BN1047_00921 | Beta-ketoacyl synthase. | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.512 |
CDQ43063.1 | CDQ42453.1 | BN1047_00924 | BN1047_00306 | Hypothetical protein. | Beta-ketoacyl synthase. | 0.512 |
CDQ43063.1 | CDQ43064.1 | BN1047_00924 | BN1047_00925 | Hypothetical protein. | Glutamate--ammonia ligase; Belongs to the glutamine synthetase family. | 0.595 |
CDQ43063.1 | CDQ43065.1 | BN1047_00924 | BN1047_00926 | Hypothetical protein. | Putative glutamine amidotransferase. | 0.607 |
CDQ43063.1 | CDQ43066.1 | BN1047_00924 | BN1047_00927 | Hypothetical protein. | Betaine-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.535 |
CDQ43063.1 | CDQ43067.1 | BN1047_00924 | BN1047_00928 | Hypothetical protein. | Short chain dehydrogenase. | 0.796 |
CDQ43063.1 | CDQ43068.1 | BN1047_00924 | BN1047_00929 | Hypothetical protein. | GntR family transcriptional regulator. | 0.493 |
CDQ43063.1 | CDQ44208.1 | BN1047_00924 | BN1047_02084 | Hypothetical protein. | Acyl transferase domain-containing protein. | 0.512 |
CDQ43063.1 | CDQ46650.1 | BN1047_00924 | BN1047_04559 | Hypothetical protein. | 3-oxoacyl-ACP reductase. | 0.412 |
CDQ43063.1 | cobQ | BN1047_00924 | BN1047_00922 | Hypothetical protein. | Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. | 0.686 |
CDQ43063.1 | map | BN1047_00924 | BN1047_00921 | Hypothetical protein. | Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily. | 0.672 |
CDQ43064.1 | CDQ42453.1 | BN1047_00925 | BN1047_00306 | Glutamate--ammonia ligase; Belongs to the glutamine synthetase family. | Beta-ketoacyl synthase. | 0.407 |
CDQ43064.1 | CDQ43063.1 | BN1047_00925 | BN1047_00924 | Glutamate--ammonia ligase; Belongs to the glutamine synthetase family. | Hypothetical protein. | 0.595 |
CDQ43064.1 | CDQ43065.1 | BN1047_00925 | BN1047_00926 | Glutamate--ammonia ligase; Belongs to the glutamine synthetase family. | Putative glutamine amidotransferase. | 0.936 |
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