Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDQ43051.1 | CDQ43178.1 | BN1047_00912 | BN1047_01041 | Cytochrome c biogenesis protein. | Resolvase domain-containing protein. | 0.440 |
CDQ43051.1 | CDQ43319.1 | BN1047_00912 | BN1047_01184 | Cytochrome c biogenesis protein. | Cytochrome c biogenesis protein, transmembrane region. | 0.648 |
CDQ43051.1 | pinR | BN1047_00912 | BN1047_03588 | Cytochrome c biogenesis protein. | Site-specific recombinase PinR. | 0.440 |
CDQ43178.1 | CDQ43051.1 | BN1047_01041 | BN1047_00912 | Resolvase domain-containing protein. | Cytochrome c biogenesis protein. | 0.440 |
CDQ43178.1 | CDQ43180.1 | BN1047_01041 | BN1047_01043 | Resolvase domain-containing protein. | Hypothetical protein. | 0.518 |
CDQ43178.1 | CDQ43187.1 | BN1047_01041 | BN1047_01050 | Resolvase domain-containing protein. | Phage integrase family protein; Belongs to the 'phage' integrase family. | 0.441 |
CDQ43178.1 | CDQ43319.1 | BN1047_01041 | BN1047_01184 | Resolvase domain-containing protein. | Cytochrome c biogenesis protein, transmembrane region. | 0.406 |
CDQ43178.1 | afsR | BN1047_01041 | BN1047_01042 | Resolvase domain-containing protein. | Regulatory protein AfsR. | 0.537 |
CDQ43178.1 | pinR | BN1047_01041 | BN1047_03588 | Resolvase domain-containing protein. | Site-specific recombinase PinR. | 0.741 |
CDQ43180.1 | CDQ43178.1 | BN1047_01043 | BN1047_01041 | Hypothetical protein. | Resolvase domain-containing protein. | 0.518 |
CDQ43180.1 | afsR | BN1047_01043 | BN1047_01042 | Hypothetical protein. | Regulatory protein AfsR. | 0.773 |
CDQ43187.1 | CDQ43178.1 | BN1047_01050 | BN1047_01041 | Phage integrase family protein; Belongs to the 'phage' integrase family. | Resolvase domain-containing protein. | 0.441 |
CDQ43319.1 | CDQ43051.1 | BN1047_01184 | BN1047_00912 | Cytochrome c biogenesis protein, transmembrane region. | Cytochrome c biogenesis protein. | 0.648 |
CDQ43319.1 | CDQ43178.1 | BN1047_01184 | BN1047_01041 | Cytochrome c biogenesis protein, transmembrane region. | Resolvase domain-containing protein. | 0.406 |
CDQ43319.1 | pinR | BN1047_01184 | BN1047_03588 | Cytochrome c biogenesis protein, transmembrane region. | Site-specific recombinase PinR. | 0.406 |
afsR | CDQ43178.1 | BN1047_01042 | BN1047_01041 | Regulatory protein AfsR. | Resolvase domain-containing protein. | 0.537 |
afsR | CDQ43180.1 | BN1047_01042 | BN1047_01043 | Regulatory protein AfsR. | Hypothetical protein. | 0.773 |
pinR | CDQ43051.1 | BN1047_03588 | BN1047_00912 | Site-specific recombinase PinR. | Cytochrome c biogenesis protein. | 0.440 |
pinR | CDQ43178.1 | BN1047_03588 | BN1047_01041 | Site-specific recombinase PinR. | Resolvase domain-containing protein. | 0.741 |
pinR | CDQ43319.1 | BN1047_03588 | BN1047_01184 | Site-specific recombinase PinR. | Cytochrome c biogenesis protein, transmembrane region. | 0.406 |