Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDQ43235.1 | mraY | BN1047_01100 | BN1047_02945 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily. | 0.589 |
CDQ43235.1 | uppP | BN1047_01100 | BN1047_02173 | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.569 |
CDQ44292.1 | CDQ44293.1 | BN1047_02170 | BN1047_02171 | Hypothetical protein. | SMP-30/gluconolaconase/LRE domain-containing protein. | 0.924 |
CDQ44292.1 | CDQ44294.1 | BN1047_02170 | BN1047_02172 | Hypothetical protein. | Hypothetical protein. | 0.613 |
CDQ44292.1 | CDQ44296.1 | BN1047_02170 | BN1047_02174 | Hypothetical protein. | Phosphoglycerate mutase. | 0.561 |
CDQ44292.1 | CDQ44297.1 | BN1047_02170 | BN1047_02175 | Hypothetical protein. | Hypothetical protein. | 0.485 |
CDQ44292.1 | CDQ44298.1 | BN1047_02170 | BN1047_02176 | Hypothetical protein. | Phosphatidylinositol 3-and 4-kinase catalytic subunit. | 0.477 |
CDQ44292.1 | pyrD | BN1047_02170 | BN1047_02169 | Hypothetical protein. | Dihydroorotate dehydrogenase 2; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.881 |
CDQ44292.1 | uppP | BN1047_02170 | BN1047_02173 | Hypothetical protein. | Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.558 |
CDQ44293.1 | CDQ44292.1 | BN1047_02171 | BN1047_02170 | SMP-30/gluconolaconase/LRE domain-containing protein. | Hypothetical protein. | 0.924 |
CDQ44293.1 | CDQ44294.1 | BN1047_02171 | BN1047_02172 | SMP-30/gluconolaconase/LRE domain-containing protein. | Hypothetical protein. | 0.624 |
CDQ44293.1 | CDQ44296.1 | BN1047_02171 | BN1047_02174 | SMP-30/gluconolaconase/LRE domain-containing protein. | Phosphoglycerate mutase. | 0.484 |
CDQ44293.1 | CDQ44297.1 | BN1047_02171 | BN1047_02175 | SMP-30/gluconolaconase/LRE domain-containing protein. | Hypothetical protein. | 0.438 |
CDQ44293.1 | CDQ44298.1 | BN1047_02171 | BN1047_02176 | SMP-30/gluconolaconase/LRE domain-containing protein. | Phosphatidylinositol 3-and 4-kinase catalytic subunit. | 0.433 |
CDQ44293.1 | pyrD | BN1047_02171 | BN1047_02169 | SMP-30/gluconolaconase/LRE domain-containing protein. | Dihydroorotate dehydrogenase 2; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.881 |
CDQ44293.1 | uppP | BN1047_02171 | BN1047_02173 | SMP-30/gluconolaconase/LRE domain-containing protein. | Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.606 |
CDQ44294.1 | CDQ44292.1 | BN1047_02172 | BN1047_02170 | Hypothetical protein. | Hypothetical protein. | 0.613 |
CDQ44294.1 | CDQ44293.1 | BN1047_02172 | BN1047_02171 | Hypothetical protein. | SMP-30/gluconolaconase/LRE domain-containing protein. | 0.624 |
CDQ44294.1 | CDQ44296.1 | BN1047_02172 | BN1047_02174 | Hypothetical protein. | Phosphoglycerate mutase. | 0.752 |
CDQ44294.1 | CDQ44297.1 | BN1047_02172 | BN1047_02175 | Hypothetical protein. | Hypothetical protein. | 0.538 |
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