STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ44381.1Binding-protein-dependent transport system inner membrane protein. (283 aa)    
Predicted Functional Partners:
CDQ44382.1
ABC-type spermidine/putrescine transport system, permease component I.
 
 0.999
CDQ44383.1
Spermidine/putrescine-binding periplasmic protein.
 
 0.999
potA
Spermidine/putrescine ABC transporter ATPase; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
 0.994
CDQ43674.1
ABC-type spermidine/putrescine transporter, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 0.925
CDQ44409.1
ABC transporter; Belongs to the ABC transporter superfamily.
 
 
 0.920
CDQ45578.1
Ferric cations import ATP-binding protein FbpC; Belongs to the ABC transporter superfamily.
 
 
 0.915
CDQ45615.1
Amino acid ABC transporter membrane protein, PAAT family; amino acid ABC transporter substrate-binding protein, PAAT family.
 
  
 0.913
fbpC
ABC transporter-like protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
 
 
 0.897
cysA
Sulfate ABC transporter ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
  
 0.830
CDQ44159.1
ABC transporter ATPase; Belongs to the ABC transporter superfamily.
 
  
 0.799
Your Current Organism:
Mycolicibacterium neoaurum
NCBI taxonomy Id: 1795
Other names: ATCC 25795, CCUG 37665, CIP 105387, DSM 44074, HAMBI 2273, JCM 6365, M. neoaurum, Mycobacterium neoaurum, Mycobacterium sp. ATCC 23071, Mycobacterium sp. ATCC 25798, Mycobacterium sp. ATCC 25799, Mycobacterium sp. ATCC 25800, Mycobacterium sp. ATCC 25803, Mycobacterium sp. ATCC 27277, NCTC 10818
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