Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDQ43219.1 | CDQ45296.1 | BN1047_01083 | BN1047_03190 | acyl-CoA dehydrogenase domain-containing protein. | 3-hydroxyacyl-CoA dehydrogenase. | 0.993 |
CDQ43219.1 | CDQ45643.1 | BN1047_01083 | BN1047_03542 | acyl-CoA dehydrogenase domain-containing protein. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.943 |
CDQ43219.1 | CDQ45974.1 | BN1047_01083 | BN1047_03877 | acyl-CoA dehydrogenase domain-containing protein. | 3-hydroxy-3-methylglutaryl-CoA lyase. | 0.491 |
CDQ43219.1 | CDQ46815.1 | BN1047_01083 | BN1047_04729 | acyl-CoA dehydrogenase domain-containing protein. | Methylmalonate-semialdehyde dehydrogenase. | 0.914 |
CDQ43219.1 | fadB2 | BN1047_01083 | BN1047_00556 | acyl-CoA dehydrogenase domain-containing protein. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.510 |
CDQ43219.1 | leuA-2 | BN1047_01083 | BN1047_05249 | acyl-CoA dehydrogenase domain-containing protein. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.472 |
CDQ43219.1 | pta | BN1047_01083 | BN1047_00466 | acyl-CoA dehydrogenase domain-containing protein. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.908 |
CDQ44809.1 | CDQ45296.1 | BN1047_02689 | BN1047_03190 | 3-ketoacyl-CoA thiolase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.934 |
CDQ44809.1 | CDQ45643.1 | BN1047_02689 | BN1047_03542 | 3-ketoacyl-CoA thiolase. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.996 |
CDQ44809.1 | CDQ45974.1 | BN1047_02689 | BN1047_03877 | 3-ketoacyl-CoA thiolase. | 3-hydroxy-3-methylglutaryl-CoA lyase. | 0.908 |
CDQ44809.1 | fadB2 | BN1047_02689 | BN1047_00556 | 3-ketoacyl-CoA thiolase. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.908 |
CDQ45296.1 | CDQ43219.1 | BN1047_03190 | BN1047_01083 | 3-hydroxyacyl-CoA dehydrogenase. | acyl-CoA dehydrogenase domain-containing protein. | 0.993 |
CDQ45296.1 | CDQ44809.1 | BN1047_03190 | BN1047_02689 | 3-hydroxyacyl-CoA dehydrogenase. | 3-ketoacyl-CoA thiolase. | 0.934 |
CDQ45296.1 | CDQ45643.1 | BN1047_03190 | BN1047_03542 | 3-hydroxyacyl-CoA dehydrogenase. | acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.996 |
CDQ45296.1 | CDQ45974.1 | BN1047_03190 | BN1047_03877 | 3-hydroxyacyl-CoA dehydrogenase. | 3-hydroxy-3-methylglutaryl-CoA lyase. | 0.439 |
CDQ45296.1 | CDQ46815.1 | BN1047_03190 | BN1047_04729 | 3-hydroxyacyl-CoA dehydrogenase. | Methylmalonate-semialdehyde dehydrogenase. | 0.926 |
CDQ45296.1 | fadB2 | BN1047_03190 | BN1047_00556 | 3-hydroxyacyl-CoA dehydrogenase. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.952 |
CDQ45296.1 | glcB | BN1047_03190 | BN1047_02543 | 3-hydroxyacyl-CoA dehydrogenase. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.604 |
CDQ45296.1 | leuA-2 | BN1047_03190 | BN1047_05249 | 3-hydroxyacyl-CoA dehydrogenase. | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily. | 0.439 |
CDQ45296.1 | pta | BN1047_03190 | BN1047_00466 | 3-hydroxyacyl-CoA dehydrogenase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.914 |
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