STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ45660.1Hypothetical protein. (450 aa)    
Predicted Functional Partners:
uppS
UDP diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
       0.886
CDQ45658.1
Hemolysin III family channel protein.
       0.725
CDQ45661.1
Hypothetical protein.
       0.713
CDQ46412.1
Hypothetical alanine and proline rich protein.
  
     0.689
CDQ42686.1
Hypothetical protein.
  
     0.667
CDQ43276.1
TQXA domain protein.
  
     0.662
CDQ45758.1
Acyltransferase family protein.
  
     0.635
CDQ43745.1
Hypothetical protein.
  
     0.605
CDQ47152.1
Hypothetical protein.
  
     0.599
CDQ42389.1
Twin-arginine translocation pathway signal.
  
     0.593
Your Current Organism:
Mycolicibacterium neoaurum
NCBI taxonomy Id: 1795
Other names: ATCC 25795, CCUG 37665, CIP 105387, DSM 44074, HAMBI 2273, JCM 6365, M. neoaurum, Mycobacterium neoaurum, Mycobacterium sp. ATCC 23071, Mycobacterium sp. ATCC 25798, Mycobacterium sp. ATCC 25799, Mycobacterium sp. ATCC 25800, Mycobacterium sp. ATCC 25803, Mycobacterium sp. ATCC 27277, NCTC 10818
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.