Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDQ42217.1 | CDQ45866.1 | BN1047_00066 | BN1047_03766 | Type VII secretion protein EccB, Actinobacterial. | Hypothetical protein. | 0.527 |
CDQ42290.1 | CDQ43576.1 | BN1047_00142 | BN1047_01447 | Hypothetical protein. | Arabinosyltransferase B. | 0.421 |
CDQ42290.1 | CDQ45866.1 | BN1047_00142 | BN1047_03766 | Hypothetical protein. | Hypothetical protein. | 0.527 |
CDQ42311.1 | CDQ42312.1 | BN1047_00163 | BN1047_00164 | Membrane protein. | Membrane protein. | 0.553 |
CDQ42311.1 | CDQ45866.1 | BN1047_00163 | BN1047_03766 | Membrane protein. | Hypothetical protein. | 0.527 |
CDQ42312.1 | CDQ42311.1 | BN1047_00164 | BN1047_00163 | Membrane protein. | Membrane protein. | 0.553 |
CDQ42312.1 | CDQ45866.1 | BN1047_00164 | BN1047_03766 | Membrane protein. | Hypothetical protein. | 0.527 |
CDQ43429.1 | CDQ45866.1 | BN1047_01295 | BN1047_03766 | Hypothetical protein. | Hypothetical protein. | 0.527 |
CDQ43468.1 | CDQ43572.1 | BN1047_01335 | BN1047_01443 | Type VII secretion protein EccB, Actinobacterial. | Arabinosyltransferase A. | 0.415 |
CDQ43468.1 | CDQ43576.1 | BN1047_01335 | BN1047_01447 | Type VII secretion protein EccB, Actinobacterial. | Arabinosyltransferase B. | 0.467 |
CDQ43468.1 | CDQ45866.1 | BN1047_01335 | BN1047_03766 | Type VII secretion protein EccB, Actinobacterial. | Hypothetical protein. | 0.527 |
CDQ43572.1 | CDQ43468.1 | BN1047_01443 | BN1047_01335 | Arabinosyltransferase A. | Type VII secretion protein EccB, Actinobacterial. | 0.415 |
CDQ43572.1 | CDQ43576.1 | BN1047_01443 | BN1047_01447 | Arabinosyltransferase A. | Arabinosyltransferase B. | 0.622 |
CDQ43572.1 | CDQ45866.1 | BN1047_01443 | BN1047_03766 | Arabinosyltransferase A. | Hypothetical protein. | 0.527 |
CDQ43576.1 | CDQ42290.1 | BN1047_01447 | BN1047_00142 | Arabinosyltransferase B. | Hypothetical protein. | 0.421 |
CDQ43576.1 | CDQ43468.1 | BN1047_01447 | BN1047_01335 | Arabinosyltransferase B. | Type VII secretion protein EccB, Actinobacterial. | 0.467 |
CDQ43576.1 | CDQ43572.1 | BN1047_01447 | BN1047_01443 | Arabinosyltransferase B. | Arabinosyltransferase A. | 0.622 |
CDQ43576.1 | CDQ45866.1 | BN1047_01447 | BN1047_03766 | Arabinosyltransferase B. | Hypothetical protein. | 0.527 |
CDQ45864.1 | CDQ45865.1 | BN1047_03764 | BN1047_03765 | Transcriptional regulator. | Cytochrome P450. | 0.916 |
CDQ45864.1 | CDQ45866.1 | BN1047_03764 | BN1047_03766 | Transcriptional regulator. | Hypothetical protein. | 0.678 |
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