Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDQ46625.1Organic solvents resistance ABC transporter permease. (285 aa)    
Predicted Functional Partners:
CDQ46627.1
MCE-family protein.
 
 
 0.967
CDQ46626.1
MCE-family protein.
 
 
 0.966
CDQ46629.1
MCE-family protein.
 
 
 0.949
CDQ46631.1
MCE-family protein.
 
 
 0.949
CDQ46630.1
Virulence factor Mce family protein.
 
 
 0.948
CDQ46628.1
MCE-family protein.
 
 
 0.944
CDQ46915.1
ABC transporter ATP-binding protein.
 
 
 0.937
CDQ42154.1
Virulence factor Mce family protein.
 
 
 0.914
CDQ45275.1
Virulence factor Mce family protein.
 
 
 0.891
CDQ44821.1
Virulence factor Mce family protein.
 
 
 0.890
Your Current Organism:
Mycolicibacterium neoaurum
NCBI taxonomy Id: 1795
Other names: ATCC 25795, CCUG 37665, CIP 105387, DSM 44074, HAMBI 2273, JCM 6365, M. neoaurum, Mycobacterium neoaurum, Mycobacterium sp. ATCC 23071, Mycobacterium sp. ATCC 25798, Mycobacterium sp. ATCC 25799, Mycobacterium sp. ATCC 25800, Mycobacterium sp. ATCC 25803, Mycobacterium sp. ATCC 27277, NCTC 10818
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