STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDQ47113.1Putative transmembrane protein. (78 aa)    
Predicted Functional Partners:
CDQ47109.1
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
  
    0.967
CDQ47112.1
Transmembrane protein.
  
    0.947
hemD
uroporphyrinogen-III synthase.
  
    0.946
CDQ47110.1
Hypothetical protein.
       0.873
CDQ47111.1
Hypothetical protein.
       0.839
CDQ43318.1
ResB protein required for cytochrome c biosynthesis.
   
    0.615
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
    0.599
CDQ44065.1
Shikimate-5-dehydrogenase, fungal AROM-type; Belongs to the shikimate dehydrogenase family.
   
    0.593
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
   
    0.554
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
       0.520
Your Current Organism:
Mycolicibacterium neoaurum
NCBI taxonomy Id: 1795
Other names: ATCC 25795, CCUG 37665, CIP 105387, DSM 44074, HAMBI 2273, JCM 6365, M. neoaurum, Mycobacterium neoaurum, Mycobacterium sp. ATCC 23071, Mycobacterium sp. ATCC 25798, Mycobacterium sp. ATCC 25799, Mycobacterium sp. ATCC 25800, Mycobacterium sp. ATCC 25803, Mycobacterium sp. ATCC 27277, NCTC 10818
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.