STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMM19414.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (299 aa)    
Predicted Functional Partners:
AX769_07295
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.925
AMM20836.1
beta-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.852
AMM19033.1
3-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.786
AMM21848.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.689
AX769_11355
Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.682
AMM21871.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.678
AMM21870.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.675
AMM21661.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.591
AMM21418.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.588
AMM20316.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.587
Your Current Organism:
Frondihabitans sp. PAMC28766
NCBI taxonomy Id: 1795630
Other names: F. sp. PAMC 28766, Frondihabitans sp. PAMC 28766, Frondihabitans sp. SR6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.