STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cynSCyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. (155 aa)    
Predicted Functional Partners:
cynT_2
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
 
 0.903
KLO54361.1
Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.892
KLO50346.1
Maleylpyruvate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.762
KLO50410.1
Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.757
cynT_1
Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.757
KLO50344.1
fatty-acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.686
KLO50342.1
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.676
KLO50343.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.676
ychM
Sulfate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.614
KLO54621.1
Sulfate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.614
Your Current Organism:
Mycolicibacterium senegalense
NCBI taxonomy Id: 1796
Other names: ATCC 35796, CCUG 21001, CIP 104941, DSM 43656, JCM 15467, Mycobacterium farcinogenes subsp. senegalense, Mycobacterium senegalense, NCTC 10956, strain IEMVT 378
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