STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLO51031.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0102 family. (122 aa)    
Predicted Functional Partners:
comM
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.965
smf
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.936
viuB
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.704
KLO53276.1
Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.626
ruvC
Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.
 
     0.620
KLO51065.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.601
pdhB
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.567
tesB_4
acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.526
frc_8
Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.
       0.526
nagD_2
HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.522
Your Current Organism:
Mycolicibacterium senegalense
NCBI taxonomy Id: 1796
Other names: ATCC 35796, CCUG 21001, CIP 104941, DSM 43656, JCM 15467, Mycobacterium farcinogenes subsp. senegalense, Mycobacterium senegalense, NCTC 10956, strain IEMVT 378
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.