STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pamO_6Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (538 aa)    
Predicted Functional Partners:
rffG_2
NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.839
KLO54602.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.776
KLO51203.1
F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.606
adh_4
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.585
estB_1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.582
hapE_6
4-hydroxyacetophenone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.474
hapE_7
4-hydroxyacetophenone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.471
hapE_4
Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.470
KLO48364.1
4-hydroxyacetophenone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.465
hapE_5
4-hydroxyacetophenone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.454
Your Current Organism:
Mycolicibacterium senegalense
NCBI taxonomy Id: 1796
Other names: ATCC 35796, CCUG 21001, CIP 104941, DSM 43656, JCM 15467, Mycobacterium farcinogenes subsp. senegalense, Mycobacterium senegalense, NCTC 10956, strain IEMVT 378
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.