STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pduCPropanediol dehydratase; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology. (572 aa)    
Predicted Functional Partners:
pduD
Propanediol utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.999
pduE_2
Glycerol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.998
pduE_1
Propanediol utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.993
pduE_3
Propanediol utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
ddrA_2
Glycerol dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.976
KLO54682.1
pduH protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.972
KLO51745.1
ATP:cob(I)alamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.784
ddrA_3
Diol dehydratase reactivation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.777
dhaB_4
Propanediol dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.678
dhaB_1
Propanediol dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.675
Your Current Organism:
Mycolicibacterium senegalense
NCBI taxonomy Id: 1796
Other names: ATCC 35796, CCUG 21001, CIP 104941, DSM 43656, JCM 15467, Mycobacterium farcinogenes subsp. senegalense, Mycobacterium senegalense, NCTC 10956, strain IEMVT 378
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.