STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLO53985.1GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)    
Predicted Functional Partners:
pcaF_2
acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.813
KLO53490.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.783
cbs
Cystathionine beta-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.720
cenA
1,4-beta-glucanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase family 6.
  
 0.710
KLO54447.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.699
KLO53661.1
Kanamycin biosynthetic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.699
KLO53776.1
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.699
KLO52841.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.662
KLO54245.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.619
lipU_1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.581
Your Current Organism:
Mycolicibacterium senegalense
NCBI taxonomy Id: 1796
Other names: ATCC 35796, CCUG 21001, CIP 104941, DSM 43656, JCM 15467, Mycobacterium farcinogenes subsp. senegalense, Mycobacterium senegalense, NCTC 10956, strain IEMVT 378
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