Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KLO54241.1 | typA | ABW05_25030 | ABW05_25020 | Monoacyl phosphatidylinositol tetramannoside-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.641 |
| engA | guaA_2 | ABW05_32250 | ABW05_09200 | GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.454 |
| engA | rplA | ABW05_32250 | ABW05_10540 | GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.719 |
| engA | typA | ABW05_32250 | ABW05_25020 | GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.808 |
| guaA_2 | engA | ABW05_09200 | ABW05_32250 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.454 |
| guaA_2 | infC | ABW05_09200 | ABW05_26200 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Translation initiation factor IF-3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IF-3 family. | 0.424 |
| guaA_2 | rplA | ABW05_09200 | ABW05_10540 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.930 |
| guaA_2 | rplD | ABW05_09200 | ABW05_10185 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.531 |
| guaA_2 | rpoB | ABW05_09200 | ABW05_10420 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.913 |
| guaA_2 | rpsI | ABW05_09200 | ABW05_09585 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. | 0.584 |
| guaA_2 | rpsJ | ABW05_09200 | ABW05_10195 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.672 |
| guaA_2 | typA | ABW05_09200 | ABW05_25020 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.730 |
| helY | typA | ABW05_26675 | ABW05_25020 | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. | GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.805 |
| infC | guaA_2 | ABW05_26200 | ABW05_09200 | Translation initiation factor IF-3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IF-3 family. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.424 |
| infC | rplA | ABW05_26200 | ABW05_10540 | Translation initiation factor IF-3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IF-3 family. | 50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.951 |
| infC | rplD | ABW05_26200 | ABW05_10185 | Translation initiation factor IF-3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IF-3 family. | 50S ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.950 |
| infC | rpoB | ABW05_26200 | ABW05_10420 | Translation initiation factor IF-3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IF-3 family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.652 |
| infC | rpsI | ABW05_26200 | ABW05_09585 | Translation initiation factor IF-3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IF-3 family. | 30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family. | 0.975 |
| infC | rpsJ | ABW05_26200 | ABW05_10195 | Translation initiation factor IF-3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IF-3 family. | 30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.985 |
| infC | typA | ABW05_26200 | ABW05_25020 | Translation initiation factor IF-3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IF-3 family. | GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.649 |
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