STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001592875_00094Unannotated protein. (330 aa)    
Predicted Functional Partners:
GCA_001592875_00096
Unannotated protein.
 
  
 0.992
GCA_001592875_00097
Unannotated protein.
 
 
 0.992
GCA_001592875_00098
Unannotated protein.
 
 
 0.983
GCA_001592875_00099
Unannotated protein.
 
 
 0.961
GCA_001592875_00095
Unannotated protein.
  
    0.883
GCA_001592875_03262
Unannotated protein.
 
 
  0.835
GCA_001592875_00100
Unannotated protein.
 
  
 0.792
GCA_001592875_00092
Unannotated protein.
    
  0.742
GCA_001592875_02743
Unannotated protein.
  
     0.687
GCA_001592875_02773
Unannotated protein.
  
     0.666
Your Current Organism:
Pseudomonas sp. BMS12
NCBI taxonomy Id: 1796033
Other names: P. sp. BMS12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.