STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001592875_03183Unannotated protein. (312 aa)    
Predicted Functional Partners:
GCA_001592875_01185
Unannotated protein.
  
  
 0.710
GCA_001592875_00684
Unannotated protein.
      0.668
GCA_001592875_00233
Unannotated protein.
  
 
 0.642
GCA_001592875_03184
Unannotated protein.
       0.619
GCA_001592875_03182
Unannotated protein.
       0.493
GCA_001592875_04055
Unannotated protein.
   
  
 0.491
GCA_001592875_04157
Unannotated protein.
  
    0.491
GCA_001592875_01558
Unannotated protein.
  
 
 0.463
GCA_001592875_04173
Unannotated protein.
  
  
 0.454
GCA_001592875_02239
Unannotated protein.
 
  
 0.449
Your Current Organism:
Pseudomonas sp. BMS12
NCBI taxonomy Id: 1796033
Other names: P. sp. BMS12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.