STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CZF79166.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
torR
TorCAD operon transcriptional regulatory protein TorR.
       0.793
luxR_2
HTH-type transcriptional regulator LuxR.
  
     0.682
lpoB
Penicillin-binding protein activator LpoB precursor.
  
     0.633
CZF85072.1
Hypothetical protein.
  
     0.619
CZF82740.1
Endonuclease/Exonuclease/phosphatase family protein.
  
     0.572
CZF84183.1
Surface antigen.
  
     0.570
CZF79006.1
Hypothetical protein.
  
     0.565
CZF80095.1
Tim44-like domain protein.
  
     0.560
CZF83458.1
Hypothetical protein.
  
     0.545
CZF83104.1
Hypothetical protein.
  
     0.530
Your Current Organism:
Grimontia celer
NCBI taxonomy Id: 1796497
Other names: CECT 9029, G. celer, Grimontia celer Pujalte et al. 2016, Grimontia sp. 96-237, KCTC 42960, LMG 29238, LMG:29238, strain 96-237
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.