STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANU57474.1Conjugative transposon protein TraM; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)    
Predicted Functional Partners:
ANU57472.1
Conjugative transposon protein TraK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.957
traN-2
Conjugative transposon protein TraN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.944
ANU57470.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.940
ANU57466.1
Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.928
ANU57479.1
Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.926
ANU57464.1
Conjugal transfer protein TraE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.854
ANU59742.1
Adenine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.845
ANU57473.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.836
ANU57475.1
Site-specific DNA-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.833
ANU57471.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.821
Your Current Organism:
Bacteroides caecimuris
NCBI taxonomy Id: 1796613
Other names: B. caecimuris, Bacteroides caecimuris Lagkouvardos et al. 2016, Bacteroides sp. I48, DSM 26085, KCTC 15547, strain I48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.