STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4V02_025102-oxoglutarate oxidoreductase. (256 aa)    
Predicted Functional Partners:
nifJ
Pyruvate:ferredoxin (Flavodoxin) oxidoreductase.
  
 0.999
A4V02_02505
2-oxoglutarate ferredoxin oxidoreductase subunit gamma.
 0.999
A4V02_02515
3-methyl-2-oxobutanoate dehydrogenase subunit VorB.
 0.999
A4V02_04890
MFS transporter.
 
 0.999
A4V02_02520
Ferredoxin.
 
 0.994
A4V02_13435
NADP-dependent malic enzyme.
   
 0.938
A4V02_02355
Carboxylase.
  
 
 0.929
A4V02_13605
Acetyl-CoA synthetase.
 
 
 0.925
A4V02_06665
Ferredoxin.
  
 
 0.922
A4V02_04895
2-oxoacid:ferredoxin oxidoreductase subunit beta.
  
  
 
0.920
Your Current Organism:
Muribaculum intestinale
NCBI taxonomy Id: 1796646
Other names: DSM 28989, KCTC 15537, M. intestinale, Muribaculaceae bacterium DSM 100739, Muribaculaceae bacterium DSM 100746, Muribaculum intestinale Lagkouvardos et al. 2016, Parabacteroides sp. YL27, Porphyromonadaceae bacterium YL27, strain YL27
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.