STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4V02_05165Uncharacterized protein. (243 aa)    
Predicted Functional Partners:
A4V02_05170
Uncharacterized protein.
 
   
 0.953
A4V02_05175
Gliding motility-associated lipoprotein GldK.
 
   
 0.950
A4V02_05180
Gliding motility protein GldL.
 
   
 0.918
A4V02_05185
Gliding motility protein GldM.
 
   
 0.902
A4V02_05190
Uncharacterized protein.
 
   
 0.886
A4V02_02960
Cell surface protein SprA.
  
   
 0.807
A4V02_13395
Uncharacterized protein.
 
   
 0.800
porV
Type IX secretion system outer membrane channel protein PorV.
  
   
 0.789
A4V02_12680
Uncharacterized protein.
  
     0.775
A4V02_07985
Uncharacterized protein.
  
     0.773
Your Current Organism:
Muribaculum intestinale
NCBI taxonomy Id: 1796646
Other names: DSM 28989, KCTC 15537, M. intestinale, Muribaculaceae bacterium DSM 100739, Muribaculaceae bacterium DSM 100746, Muribaculum intestinale Lagkouvardos et al. 2016, Parabacteroides sp. YL27, Porphyromonadaceae bacterium YL27, strain YL27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.