STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4V02_06340Glycosyl transferase family 2. (498 aa)    
Predicted Functional Partners:
A4V02_06345
Uncharacterized protein.
 
   
 0.955
A4V02_06335
Uncharacterized protein.
 
   
 0.953
A4V02_06310
Acyl carrier protein.
 
 
 0.912
A4V02_06290
Lipid A biosynthesis acyltransferase.
     0.901
A4V02_06295
Pseudouridylate synthase.
 
    0.899
A4V02_06325
Cell envelope biogenesis protein LolA.
 
    0.897
A4V02_06300
4-hydroxybenzoyl-CoA thioesterase.
 
    0.888
A4V02_06305
Uncharacterized protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.862
A4V02_06280
SAM-dependent methyltransferase.
 
     0.848
A4V02_06355
PlsC domain-containing protein.
 
   
0.837
Your Current Organism:
Muribaculum intestinale
NCBI taxonomy Id: 1796646
Other names: DSM 28989, KCTC 15537, M. intestinale, Muribaculaceae bacterium DSM 100739, Muribaculaceae bacterium DSM 100746, Muribaculum intestinale Lagkouvardos et al. 2016, Parabacteroides sp. YL27, Porphyromonadaceae bacterium YL27, strain YL27
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.