STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4V02_07115Cyclic nucleotide-binding domain-containing protein. (189 aa)    
Predicted Functional Partners:
A4V02_09760
Helix-turn-helix domain-containing protein.
  
     0.749
A4V02_07120
RCK N-terminal domain-containing protein.
       0.610
A4V02_09935
RagB/SusD family nutrient uptake outer membrane protein.
  
     0.558
A4V02_12095
Uroporphyrinogen-III synthase.
 
    0.517
A4V02_13080
RNA polymerase Rpb6.
  
 
   0.510
A4V02_07110
Uncharacterized protein.
       0.480
A4V02_02045
Tricorn protease homolog; Degrades oligopeptides; Belongs to the peptidase S41B family.
  
     0.471
A4V02_11000
Uncharacterized protein.
  
     0.429
A4V02_00960
Uncharacterized protein.
  
     0.423
A4V02_08570
SusD/RagB family nutrient-binding outer membrane lipoprotein.
  
     0.421
Your Current Organism:
Muribaculum intestinale
NCBI taxonomy Id: 1796646
Other names: DSM 28989, KCTC 15537, M. intestinale, Muribaculaceae bacterium DSM 100739, Muribaculaceae bacterium DSM 100746, Muribaculum intestinale Lagkouvardos et al. 2016, Parabacteroides sp. YL27, Porphyromonadaceae bacterium YL27, strain YL27
Server load: low (30%) [HD]