STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4V02_07205Transcriptional regulator. (104 aa)    
Predicted Functional Partners:
A4V02_07200
Uncharacterized protein.
  
    0.645
A4V02_07195
Uncharacterized protein.
       0.628
A4V02_07190
GTP cyclohydrolase.
       0.603
A4V02_07210
Uncharacterized protein.
       0.581
A4V02_07215
Uncharacterized protein.
       0.581
A4V02_07220
Uncharacterized protein.
       0.574
A4V02_07225
Uracil-DNA glycosylase.
       0.523
A4V02_13815
TPR_REGION domain-containing protein.
 
     0.522
A4V02_07230
Uncharacterized protein.
       0.521
A4V02_07180
Transcriptional regulator.
       0.448
Your Current Organism:
Muribaculum intestinale
NCBI taxonomy Id: 1796646
Other names: DSM 28989, KCTC 15537, M. intestinale, Muribaculaceae bacterium DSM 100739, Muribaculaceae bacterium DSM 100746, Muribaculum intestinale Lagkouvardos et al. 2016, Parabacteroides sp. YL27, Porphyromonadaceae bacterium YL27, strain YL27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.