STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4V02_07770GSCFA domain-containing protein. (298 aa)    
Predicted Functional Partners:
A4V02_07775
N-acetyltransferase domain-containing protein.
       0.547
A4V02_07765
Pyruvate formate lyase-activating protein.
  
    0.532
A4V02_07755
Uncharacterized protein.
       0.525
A4V02_07760
TonB_C domain-containing protein.
       0.525
A4V02_12095
Uroporphyrinogen-III synthase.
  
     0.513
A4V02_02745
Uncharacterized protein.
  
     0.509
A4V02_11640
DNA topoisomerase (ATP-hydrolyzing).
  
    0.509
A4V02_06995
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
     0.420
A4V02_09280
Uncharacterized protein.
  
     0.419
A4V02_03045
DUF1573 domain-containing protein.
  
     0.414
Your Current Organism:
Muribaculum intestinale
NCBI taxonomy Id: 1796646
Other names: DSM 28989, KCTC 15537, M. intestinale, Muribaculaceae bacterium DSM 100739, Muribaculaceae bacterium DSM 100746, Muribaculum intestinale Lagkouvardos et al. 2016, Parabacteroides sp. YL27, Porphyromonadaceae bacterium YL27, strain YL27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.