STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4V02_08210Iron ABC transporter substrate-binding protein. (381 aa)    
Predicted Functional Partners:
A4V02_03695
Iron ABC transporter ATP-binding protein.
 
 
 0.936
A4V02_03700
Iron ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.935
A4V02_08680
Iron ABC transporter ATP-binding protein.
 
 
 0.935
A4V02_08685
Iron ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.935
A4V02_08205
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
  
  
 0.709
A4V02_03710
TonB-dependent receptor.
 
  
 0.569
A4V02_07365
TonB-dependent receptor.
 
  
 0.561
A4V02_08970
DUF4924 domain-containing protein.
  
     0.462
A4V02_08200
YigZ family protein.
       0.457
A4V02_08195
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.434
Your Current Organism:
Muribaculum intestinale
NCBI taxonomy Id: 1796646
Other names: DSM 28989, KCTC 15537, M. intestinale, Muribaculaceae bacterium DSM 100739, Muribaculaceae bacterium DSM 100746, Muribaculum intestinale Lagkouvardos et al. 2016, Parabacteroides sp. YL27, Porphyromonadaceae bacterium YL27, strain YL27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.