STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A4V02_09750Uncharacterized protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1122 aa)    
Predicted Functional Partners:
A4V02_09745
Uncharacterized protein.
 
 0.991
A4V02_09755
Efflux transporter periplasmic adaptor subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.957
A4V02_01770
Efflux transporter outer membrane subunit.
 
 0.955
A4V02_11015
Uncharacterized protein.
 
 0.887
A4V02_01760
Efflux transporter periplasmic adaptor subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.886
A4V02_11020
HlyD_D23 domain-containing protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.879
A4V02_09740
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase.
       0.655
A4V02_08620
HlyD_D23 domain-containing protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.609
A4V02_04690
Efflux RND transporter periplasmic adaptor subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.564
A4V02_04695
TolC family protein.
 
 
 0.486
Your Current Organism:
Muribaculum intestinale
NCBI taxonomy Id: 1796646
Other names: DSM 28989, KCTC 15537, M. intestinale, Muribaculaceae bacterium DSM 100739, Muribaculaceae bacterium DSM 100746, Muribaculum intestinale Lagkouvardos et al. 2016, Parabacteroides sp. YL27, Porphyromonadaceae bacterium YL27, strain YL27
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.