Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Glf | GlfT1 | RMCT_4658 | RMCT_0006 | UDP-galactopyranose mutase glf. | L-rhamnosyltransferase. | 0.886 |
Glf | GlfT2 | RMCT_4658 | RMCT_4659 | UDP-galactopyranose mutase glf. | Bifunctional UDP-galactofuranosyl transferase glfT. | 0.978 |
Glf | RfbD | RMCT_4658 | RMCT_0005 | UDP-galactopyranose mutase glf. | O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter rfbD. | 0.781 |
Glf | TagH | RMCT_4658 | RMCT_0007 | UDP-galactopyranose mutase glf. | O-antigen/lipopolysaccharide transport ATP-binding protein ABC transporter rfbE. | 0.561 |
GlfT1 | Glf | RMCT_0006 | RMCT_4658 | L-rhamnosyltransferase. | UDP-galactopyranose mutase glf. | 0.886 |
GlfT1 | GlfT2 | RMCT_0006 | RMCT_4659 | L-rhamnosyltransferase. | Bifunctional UDP-galactofuranosyl transferase glfT. | 0.962 |
GlfT1 | RMCT_0008 | RMCT_0006 | RMCT_0008 | L-rhamnosyltransferase. | Hypothetical protein. | 0.911 |
GlfT1 | RMCT_2172 | RMCT_0006 | RMCT_2172 | L-rhamnosyltransferase. | Transposase, IS4 family protein. | 0.459 |
GlfT1 | RMCT_2880 | RMCT_0006 | RMCT_2880 | L-rhamnosyltransferase. | Transposase, IS4 family protein. | 0.459 |
GlfT1 | RMCT_4607 | RMCT_0006 | RMCT_4607 | L-rhamnosyltransferase. | Transposase, IS4 family protein. | 0.459 |
GlfT1 | RfbD | RMCT_0006 | RMCT_0005 | L-rhamnosyltransferase. | O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter rfbD. | 0.993 |
GlfT1 | TagH | RMCT_0006 | RMCT_0007 | L-rhamnosyltransferase. | O-antigen/lipopolysaccharide transport ATP-binding protein ABC transporter rfbE. | 0.987 |
GlfT2 | Glf | RMCT_4659 | RMCT_4658 | Bifunctional UDP-galactofuranosyl transferase glfT. | UDP-galactopyranose mutase glf. | 0.978 |
GlfT2 | GlfT1 | RMCT_4659 | RMCT_0006 | Bifunctional UDP-galactofuranosyl transferase glfT. | L-rhamnosyltransferase. | 0.962 |
GlfT2 | RMCT_2172 | RMCT_4659 | RMCT_2172 | Bifunctional UDP-galactofuranosyl transferase glfT. | Transposase, IS4 family protein. | 0.459 |
GlfT2 | RMCT_2880 | RMCT_4659 | RMCT_2880 | Bifunctional UDP-galactofuranosyl transferase glfT. | Transposase, IS4 family protein. | 0.459 |
GlfT2 | RMCT_4607 | RMCT_4659 | RMCT_4607 | Bifunctional UDP-galactofuranosyl transferase glfT. | Transposase, IS4 family protein. | 0.459 |
GlfT2 | RfbD | RMCT_4659 | RMCT_0005 | Bifunctional UDP-galactofuranosyl transferase glfT. | O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter rfbD. | 0.774 |
GlfT2 | TagH | RMCT_4659 | RMCT_0007 | Bifunctional UDP-galactofuranosyl transferase glfT. | O-antigen/lipopolysaccharide transport ATP-binding protein ABC transporter rfbE. | 0.651 |
PpsA_2 | RfbD | RMCT_0416 | RMCT_0005 | Beta-ketoacyl synthase. | O-antigen/lipopolysaccharide transport integral membrane protein ABC transporter rfbD. | 0.616 |
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