STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0017Putative uncharacterized protein. (130 aa)    
Predicted Functional Partners:
RMCT_0018
Transcriptional regulator.
       0.780
RMCT_0019
Putative uncharacterized protein.
       0.664
CurA
Oxidoreductase, zinc-binding.
       0.639
RMCT_3956
Putative uncharacterized protein.
  
     0.552
RMCT_2519
Putative uncharacterized protein.
  
     0.548
RMCT_0481
NADH:flavin oxidoreductase.
     
 0.528
RMCT_0617
NADH:flavin oxidoreductase.
     
 0.528
Dan_1
Amidohydrolase 3.
  
     0.517
Dan_2
D-amino acid aminohydrolase.
  
     0.453
RMCT_3449
Putative uncharacterized protein.
 
     0.452
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.