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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0028Phosphoglycerate mutase. (227 aa)    
Predicted Functional Partners:
RMCT_0029
acyl-CoA dehydrogenase fadE36.
  
    0.801
FabG_30
Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein.
  
  
 0.612
RMCT_0279
Type I phosphodiesterase/nucleotide pyrophosphatase.
 
  
  0.565
cobS
Cobalamin 5-phosphate synthase cobS; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
  
 0.531
RMCT_0810
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
  
     0.522
FtsH2
ATPase central domain-containing protein; Belongs to the AAA ATPase family.
   
  0.517
EccA1_1
Type VII secretion AAA-ATPase EccA.
   
  0.517
FtsH3
ATPase; Belongs to the AAA ATPase family.
   
  0.517
EccA1_2
ATPase central domain-containing protein.
   
  0.517
RMCT_0585
Mce associated membrane protein.
 
 
 0.509
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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