STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tadACytidine/deoxycytidylate deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family. (162 aa)    
Predicted Functional Partners:
RMCT_0033
Hypothetical protein.
       0.878
GlxK
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
    0.703
RMCT_0516
HAD-superfamily hydrolase.
      0.660
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
 
  
 0.648
hisE
phosphoribosyl-ATP pyrophosphatase.
  
  
 0.644
TyrC
Prephenate dehydrogenase.
       0.621
ExoA
Exodeoxyribonuclease III Xth.
  
 
 0.615
XthA
Exodeoxyribonuclease III protein XthA.
  
 
 0.615
NplT
Alpha amylase.
    
 0.606
gpsA-2
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
 
   
 0.593
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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