Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCT_0052N-acetylmuramoyl-L-alanine amidase. (246 aa)    
Predicted Functional Partners:
LytC
Hydrolase.
  
 
 0.948
RMCT_2344
MmpS3 protein.
   
    0.692
FtsW_2
Cell division protein FtsW; Belongs to the SEDS family.
  
  
 0.682
RMCT_0054
DNA-binding protein, YbaB/EbfC family; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.
       0.645
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
     
 0.637
CwlH
Peptidoglycan binding domain-containing protein.
  
  
 0.609
RipA
NLP/P60 protein.
 
  
 0.584
RMCT_0053
Alpha/beta hydrolase fold protein, precursor.
       0.572
SigE
ECF subfamily RNA polymerase sigma-24 subunit; Belongs to the sigma-70 factor family. ECF subfamily.
  
  
 0.565
RMCT_2988
Protein of unknown function.
  
 
 0.511
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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