Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
OatA_6Acyltransferase 3. (395 aa)    
Predicted Functional Partners:
RMCT_4136
Protein of unknown function.
 
   
 0.664
RMCT_3296
Transmembrane protein.
 
   
 0.607
RMCT_3585
Pyrrolo-quinoline quinone.
 
     0.587
RMCT_0075
Thiopurine S-methyltransferase (tpmt) superfamily protein.
     
 0.558
RMCT_0076
Glutamate--cysteine ligase, GCS2.
       0.544
RMCT_4667
Cutinase.
 
  
 0.523
RMCT_0371
Von Willebrand factor, type A.
 
     0.501
RMCT_4147
Methyltransferase.
 
   
 0.493
RMCT_4137
Transmembrane protein.
 
   
 0.491
RMCT_3517
Membrane or exported protein.
  
  
 0.477
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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