Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CysK | Pon1 | RMCT_0094 | RMCT_0096 | Lyase. | Bifunctional membrane-associated penicillin-binding protein 1A/1B ponA2 : penicillin-insensitive transglycosylase + penicillin-sensitive transpeptidase. | 0.673 |
CysK | RMCT_0095 | RMCT_0094 | RMCT_0095 | Lyase. | Metallophosphoesterase. | 0.923 |
Pon1 | CysK | RMCT_0096 | RMCT_0094 | Bifunctional membrane-associated penicillin-binding protein 1A/1B ponA2 : penicillin-insensitive transglycosylase + penicillin-sensitive transpeptidase. | Lyase. | 0.673 |
Pon1 | RMCT_0095 | RMCT_0096 | RMCT_0095 | Bifunctional membrane-associated penicillin-binding protein 1A/1B ponA2 : penicillin-insensitive transglycosylase + penicillin-sensitive transpeptidase. | Metallophosphoesterase. | 0.747 |
RMCT_0095 | CysK | RMCT_0095 | RMCT_0094 | Metallophosphoesterase. | Lyase. | 0.923 |
RMCT_0095 | Pon1 | RMCT_0095 | RMCT_0096 | Metallophosphoesterase. | Bifunctional membrane-associated penicillin-binding protein 1A/1B ponA2 : penicillin-insensitive transglycosylase + penicillin-sensitive transpeptidase. | 0.747 |
RMCT_0095 | RMCT_0672 | RMCT_0095 | RMCT_0672 | Metallophosphoesterase. | Protein of unknown function. | 0.625 |
RMCT_0095 | RMCT_0803 | RMCT_0095 | RMCT_0803 | Metallophosphoesterase. | DNA polymerase III subunit delta. | 0.555 |
RMCT_0095 | RMCT_1556 | RMCT_0095 | RMCT_1556 | Metallophosphoesterase. | Glycosyl transferase family protein. | 0.557 |
RMCT_0095 | RMCT_3804 | RMCT_0095 | RMCT_3804 | Metallophosphoesterase. | Protein of unknown function. | 0.654 |
RMCT_0095 | RMCT_3919 | RMCT_0095 | RMCT_3919 | Metallophosphoesterase. | Transmembrane protein. | 0.517 |
RMCT_0095 | YgfZ | RMCT_0095 | RMCT_1831 | Metallophosphoesterase. | Folate-binding protein YgfZ; Belongs to the GcvT family. | 0.519 |
RMCT_0095 | pheT | RMCT_0095 | RMCT_4494 | Metallophosphoesterase. | phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.605 |
RMCT_0095 | whiA | RMCT_0095 | RMCT_3632 | Metallophosphoesterase. | Transcriptional regulatory protein whiA; Involved in cell division and chromosome segregation. | 0.571 |
RMCT_0672 | RMCT_0095 | RMCT_0672 | RMCT_0095 | Protein of unknown function. | Metallophosphoesterase. | 0.625 |
RMCT_0672 | RMCT_0803 | RMCT_0672 | RMCT_0803 | Protein of unknown function. | DNA polymerase III subunit delta. | 0.720 |
RMCT_0672 | RMCT_1556 | RMCT_0672 | RMCT_1556 | Protein of unknown function. | Glycosyl transferase family protein. | 0.642 |
RMCT_0672 | RMCT_3804 | RMCT_0672 | RMCT_3804 | Protein of unknown function. | Protein of unknown function. | 0.735 |
RMCT_0672 | RMCT_3919 | RMCT_0672 | RMCT_3919 | Protein of unknown function. | Transmembrane protein. | 0.592 |
RMCT_0672 | YgfZ | RMCT_0672 | RMCT_1831 | Protein of unknown function. | Folate-binding protein YgfZ; Belongs to the GcvT family. | 0.485 |
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