STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TrxCThioredoxin; Belongs to the thioredoxin family. (123 aa)    
Predicted Functional Partners:
TrxB
Thioredoxin reductase.
 
 0.995
MdeA_2
Cys/Met metabolism pyridoxal-phosphate-dependent enzyme.
  
 
 0.913
SufS
Cysteine desulfurase csd; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 
  0.910
AhpF
Thioredoxin reductase.
  
 
 0.845
RMCT_2356
Glutaredoxin protein.
  
  
 0.757
EchA8_16
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.751
sodB
Superoxide dismutase Fe; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 
 0.731
Mtr
NADPH-dependent mycothiol reductase mtr.
  
 
 0.715
Bcp_2
Bacterioferritin comigratory protein bcp.
  
 
 0.666
groES
Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.
  
 
 0.660
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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