Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0185Phage T7 F exclusion suppressor FxsA. (181 aa)    
Predicted Functional Partners:
NfdA_2
Amidohydrolase.
  
  
 0.933
lnt
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
  
    0.848
ArnC
Polyprenol-monophosphomannose synthase ppm1.
  
    0.845
NfdA_1
Amidohydrolase.
  
  
 0.717
RMCT_3296
Transmembrane protein.
 
    0.708
RMCT_0184
PPOX class probable F420-dependent enzyme, Rv2061 family.
       0.704
RMCT_0183
Putative uncharacterized protein.
 
     0.652
RMCT_3336
LpqE protein.
  
 
   0.649
RMCT_0361
Peptidase M48, Ste24p.
 
  
 0.567
DegQ
Trypsin-like serine protease with C-terminal PDZ domain.
  
  
 0.567
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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