| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| HrdB | PafC | RMCT_0697 | RMCT_4337 | RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator-like protein. | 0.747 |
| HrdB | RMCT_3339 | RMCT_0697 | RMCT_3339 | RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcription factor. | 0.886 |
| HrdB | rbpA | RMCT_0697 | RMCT_0189 | RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.905 |
| HrdB | rpoA | RMCT_0697 | RMCT_0527 | RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.960 |
| HrdB | rpoB | RMCT_0697 | RMCT_2930 | RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.973 |
| HrdB | rpoC | RMCT_0697 | RMCT_2929 | RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.955 |
| HrdB | rpoZ | RMCT_0697 | RMCT_3654 | RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.895 |
| HrdB | whiA | RMCT_0697 | RMCT_3632 | RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulatory protein whiA; Involved in cell division and chromosome segregation. | 0.790 |
| HrdB | whiB-4 | RMCT_0697 | RMCT_2289 | RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulatory protein whib-like whiB2; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.767 |
| PafC | HrdB | RMCT_4337 | RMCT_0697 | Transcriptional regulator-like protein. | RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.747 |
| PafC | rbpA | RMCT_4337 | RMCT_0189 | Transcriptional regulator-like protein. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.835 |
| PafC | rpoA | RMCT_4337 | RMCT_0527 | Transcriptional regulator-like protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.772 |
| PafC | rpoB | RMCT_4337 | RMCT_2930 | Transcriptional regulator-like protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.898 |
| PafC | rpoC | RMCT_4337 | RMCT_2929 | Transcriptional regulator-like protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.783 |
| PafC | rpoZ | RMCT_4337 | RMCT_3654 | Transcriptional regulator-like protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.807 |
| PafC | sigA | RMCT_4337 | RMCT_0691 | Transcriptional regulator-like protein. | RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.891 |
| RMCT_3339 | HrdB | RMCT_3339 | RMCT_0697 | Transcription factor. | RNA polymerase sigma factor sigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.886 |
| RMCT_3339 | rbpA | RMCT_3339 | RMCT_0189 | Transcription factor. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family. | 0.978 |
| RMCT_3339 | rpoA | RMCT_3339 | RMCT_0527 | Transcription factor. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.956 |
| RMCT_3339 | rpoB | RMCT_3339 | RMCT_2930 | Transcription factor. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.980 |
