Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MmpL8_5 | RMCT_0039 | RMCT_0125 | RMCT_0039 | MMPL domain-containing protein. | Metallo-beta-lactamase superfamily enzyme. | 0.432 |
MmpL8_5 | RMCT_0191 | RMCT_0125 | RMCT_0191 | MMPL domain-containing protein. | Putative uncharacterized protein. | 0.444 |
MmpL8_5 | RMCT_3216 | RMCT_0125 | RMCT_3216 | MMPL domain-containing protein. | HNH nuclease. | 0.467 |
RMCT_0039 | MmpL8_5 | RMCT_0039 | RMCT_0125 | Metallo-beta-lactamase superfamily enzyme. | MMPL domain-containing protein. | 0.432 |
RMCT_0039 | RMCT_0121 | RMCT_0039 | RMCT_0121 | Metallo-beta-lactamase superfamily enzyme. | Phage integrase family protein. | 0.694 |
RMCT_0039 | RMCT_0191 | RMCT_0039 | RMCT_0191 | Metallo-beta-lactamase superfamily enzyme. | Putative uncharacterized protein. | 0.598 |
RMCT_0039 | RMCT_1695 | RMCT_0039 | RMCT_1695 | Metallo-beta-lactamase superfamily enzyme. | Putative uncharacterized protein. | 0.410 |
RMCT_0039 | RMCT_2925 | RMCT_0039 | RMCT_2925 | Metallo-beta-lactamase superfamily enzyme. | Phosphoesterase, PA-phosphatase related protein. | 0.633 |
RMCT_0039 | RMCT_3216 | RMCT_0039 | RMCT_3216 | Metallo-beta-lactamase superfamily enzyme. | HNH nuclease. | 0.618 |
RMCT_0039 | RsmC | RMCT_0039 | RMCT_2325 | Metallo-beta-lactamase superfamily enzyme. | Methyltransferase small; Belongs to the methyltransferase superfamily. | 0.416 |
RMCT_0121 | RMCT_0039 | RMCT_0121 | RMCT_0039 | Phage integrase family protein. | Metallo-beta-lactamase superfamily enzyme. | 0.694 |
RMCT_0121 | RMCT_0191 | RMCT_0121 | RMCT_0191 | Phage integrase family protein. | Putative uncharacterized protein. | 0.463 |
RMCT_0121 | RMCT_1695 | RMCT_0121 | RMCT_1695 | Phage integrase family protein. | Putative uncharacterized protein. | 0.545 |
RMCT_0121 | RMCT_2925 | RMCT_0121 | RMCT_2925 | Phage integrase family protein. | Phosphoesterase, PA-phosphatase related protein. | 0.422 |
RMCT_0190 | RMCT_0191 | RMCT_0190 | RMCT_0191 | Hypothetical protein. | Putative uncharacterized protein. | 0.594 |
RMCT_0191 | MmpL8_5 | RMCT_0191 | RMCT_0125 | Putative uncharacterized protein. | MMPL domain-containing protein. | 0.444 |
RMCT_0191 | RMCT_0039 | RMCT_0191 | RMCT_0039 | Putative uncharacterized protein. | Metallo-beta-lactamase superfamily enzyme. | 0.598 |
RMCT_0191 | RMCT_0121 | RMCT_0191 | RMCT_0121 | Putative uncharacterized protein. | Phage integrase family protein. | 0.463 |
RMCT_0191 | RMCT_0190 | RMCT_0191 | RMCT_0190 | Putative uncharacterized protein. | Hypothetical protein. | 0.594 |
RMCT_0191 | RMCT_1695 | RMCT_0191 | RMCT_1695 | Putative uncharacterized protein. | Putative uncharacterized protein. | 0.548 |
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