STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0194Aminoglycoside phosphotransferase. (676 aa)    
Predicted Functional Partners:
RMCT_2241
Amidohydrolase.
 
    0.751
RMCT_3704
TetR family transcriptional regulator.
 
     0.746
RMCT_3040
acyl-CoA dehydrogenase.
 
   0.685
RMCT_3038
Ketosteroid isomerase-like protein.
  
     0.671
RMCT_2150
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
     0.670
RMCT_2404
Transcriptional regulator.
 
     0.669
PnbA_4
Carboxylesterase lipT; Belongs to the type-B carboxylesterase/lipase family.
       0.667
KstR2_7
Transcriptional regulator.
 
     0.667
RMCT_2399
Taurine catabolism dioxygenase TauD, TfdA family.
 
  
 0.654
DapA_1
Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
  
     0.653
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.