Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0200Zn-dependent hydrolase. (231 aa)    
Predicted Functional Partners:
FccB
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
   
 0.548
BedA
NAD(FAD)-dependent dehydrogenase.
   
 0.548
RMCT_0201
Predicted protein.
       0.517
RMCT_0202
Predicted protein.
       0.517
RMCT_3019
Integrase.
  
  
 0.495
Pks2
Polyketide synthase pks5.
 
 
 0.470
PolS_2
Short chain dehydrogenase.
 
  
 0.461
MoeZ
Molybdopterin biosynthesis-like protein MoeZ.
  
 
 0.442
BaeB_3
Beta-lactamase domain-containing protein.
  
 
 0.435
YgaP
Rhodanese domain-containing protein.
  
 
 0.435
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.