Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Rcp1Response regulator receiver protein. (148 aa)    
Predicted Functional Partners:
AfsQ1
Response regulator receiver modulated serine phosphatase.
 
   
 0.970
Cph1
Two-component system sensor kinase.
 
   
 0.961
RMCT_4559
Stage II sporulation protein E.
 
 
 0.821
DevS
GAF sensor signal transduction histidine kinase.
  
 
 0.659
NreB_1
GAF sensor signal transduction histidine kinase.
  
 
 0.614
NreB_2
Two-component system sensor kinase.
  
 
 0.614
RMCT_4446
Histidine kinase.
  
 
 0.614
ArlS_2
Histidine kinase.
 
 
 0.599
RMCT_1692
Putative uncharacterized protein.
 
  
 0.583
Cya_1
Adenylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
  
 
 0.539
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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