STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AfsQ1Response regulator receiver modulated serine phosphatase. (407 aa)    
Predicted Functional Partners:
Cph1
Two-component system sensor kinase.
  
 0.990
Rcp1
Response regulator receiver protein.
 
   
 0.985
RMCT_4559
Stage II sporulation protein E.
 
 
0.888
RMCT_1692
Putative uncharacterized protein.
 
 
 0.872
RMCT_0290
Anti-sigma regulatory factor.
 
 
 0.809
RMCT_4561
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.736
RsbV
Anti-sigma-factor antagonist.
 
 
 0.729
RMCT_4567
FO synthase.
  
  
 0.714
RsbT
Serine/threonine-protein kinase RsbT.
 
 
 0.704
RMCT_1474
Putative uncharacterized protein.
 
 
 0.700
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.