Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0216Putative uncharacterized protein. (363 aa)    
Predicted Functional Partners:
Acr1_2
Dehydrogenase.
  
 
 0.754
RMCT_3968
Luciferase family protein.
 
     0.714
RMCT_3423
Luciferase-like protein.
 
     0.696
MhpC
Alpha/beta hydrolase.
 
     0.666
RMCT_3427
Amidohydrolase.
 
    0.657
RMCT_0952
Amidohydrolase 2.
 
    0.651
RMCT_0990
Thioesterase.
 
   
 0.624
RMCT_3038
Ketosteroid isomerase-like protein.
  
     0.615
RMCT_0958
TetR family transcriptional regulator.
 
     0.603
RMCT_0983
Amidohydrolase.
 
    0.565
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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