STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YvrBABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (340 aa)    
Predicted Functional Partners:
FhuC
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase component.
 
 
 0.986
RMCT_0220
Periplasmic binding protein.
 
 
 0.966
HmuV
Iron siderophore/cobalamin ABC transporter ATP-binding protein.
 
 
 0.943
YusV_1
ABC transporter ATP-binding protein.
 
 
 0.941
RMCT_1307
Periplasmic binding protein.
 
 
 0.922
HmuT
ABC transporter substrate-binding protein.
 
 
 0.901
YfiY
Fe(III)-dicitrate-binding periplasmic lipoprotein fecB.
 
 
 0.737
RMCT_1274
Heme iron utilization protein.
  
  
 0.460
CysW_1
ABC-type Fe3+ transporter, permease.
   
  
 0.455
LolD
ABC transporter ATP-binding protein.
  
  
 0.443
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
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