STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCT_0251Hypothetical protein. (146 aa)    
Predicted Functional Partners:
RMCT_0249
Luciferase family protein.
 
     0.709
RMCT_0250
Transmembrane protein.
       0.625
Puo_2
Amine oxidase.
       0.554
EchA8_15
enoyl-CoA hydratase/carnithine racemase.
       0.554
FadD_9
acyl-CoA synthetase.
       0.554
UvrA_2
Excinuclease ABC subunit A.
       0.554
RMCT_0248
UDP-glucuronosyl/UDP-glucosyltransferase.
       0.532
RMCT_4450
Polyketide cyclase/dehydrase and lipid transport.
  
     0.512
RMCT_2050
Putative uncharacterized protein.
  
     0.504
RMCT_0090
Putative uncharacterized protein.
  
     0.492
Your Current Organism:
Mycolicibacterium thermoresistibile
NCBI taxonomy Id: 1797
Other names: ATCC 19527, CCUG 28008, CCUG 41353, CIP 105390, DSM 44167, JCM 6362, M. thermoresistibile, Mycobacterium thermoresistibile, NCTC 10409
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.